Please wait a minute...
浙江大学学报(农业与生命科学版)  2020, Vol. 46 Issue (2): 254-262    DOI: 10.3785/j.issn.1008-9209.2019.03.281
动物科学与动物医学     
2种养殖模式下蛋鸭大肠埃希菌毒力基因和耐药特征分析
赵燕1(),金俊杰1,任敏敏2,侯凤香1,刘素贞1,薛成俊3,肖英平2()
1.温州市农业科学研究院动物科学研究所,浙江 温州 325000
2.浙江省农业科学院农产品质量标准研究所,杭州 310021
3.苍南县畜牧兽医局,浙江 苍南 325800
Virulence genes and drug resistance characteristics of Escherichia coli in laying duck under the two different breeding modes
Yan ZHAO1(),Junjie JIN1,Minmin REN2,Fengxiang HOU1,Suzhen LIU1,Chengjun XUE3,Yingping XIAO2()
1.Institute of Animal Sciences, Wenzhou Academy of Agricultural Sciences, Wenzhou 325000, Zhejiang, China
2.Institute of Quality and Standard for Agricultural Products, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
3.Cangnan County Animal Husbandry and Veterinary Bureau, Cangnan 325800, Zhejiang, China
 全文: PDF(948 KB)   HTML
摘要:

为比较分析在网床水面圈养与网床全旱养2种不同养殖模式下蛋鸭肠道中大肠埃希菌的毒力基因状况和耐药特征,分别在温州地区选择3家网床水面圈养和3家网床全旱养的蛋鸭场,每个蛋鸭场各选取10只蛋鸭,用棉拭子在直肠中采集微生物,用于大肠埃希菌分离,采用VITEK 2 COMPACT全自动细菌鉴定及药敏分析系统对分离株进行鉴定和开展耐药表型分析,并通过聚合酶链式反应(polymerase chain reaction, PCR)扩增毒力基因、耐药基因和Ⅰ型整合酶基因。结果表明:蛋鸭中大肠埃希菌的分离率为100%;网床全旱养蛋鸭肠道大肠埃希菌的毒力基因eaeipa HinvEaggRpic检出率高于网床水面圈养蛋鸭。对于耐药表型,网床全旱养蛋鸭肠道大肠埃希菌耐药数≥3的菌株比例为23.33%,而网床水面圈养中耐药数≥3的菌株比例为10.00%。同样地,耐药基因和Ⅰ型整合酶基因的检出率也为网床全旱养高于网床水面圈养。10株Ⅰ型整合子阳性大肠埃希菌中4株携带基因盒插入片段,其中:1株来源于网床水面圈养蛋鸭,其大肠埃希菌Ⅰ型整合子基因盒插入的为dfrA12-aadA2;3株来源于网床全旱养蛋鸭,均为dfrA1-aadA1。网床全旱养蛋鸭肠道大肠埃希菌的毒力基因携带率和耐药性表型均高于网床水面圈养蛋鸭,说明养殖模式变化对水禽肠道微生物耐药性可产生一定的影响。

关键词: 蛋鸭大肠埃希菌耐药表型耐药基因毒力基因Ⅰ型整合子    
Abstract:

This study mainly compared the virulence genes and drug resistance characteristics of Escherichia coli in laying ducks under the two different breeding modes: net bed with pool and net bed dry-system. Six farms including three net beds with pool and three net bed dry-systems were selected in Wenzhou, Zhejiang Province, and ten laying ducks were collected from each farm. The cotton swabs were used to collect microorganisms in the rectum forthe isolation of E. coli. The VITEK 2 COMPACT analysis system was used to identify the isolates and analyze the drug resistance profile. The virulence genes, drug-resistant genes and class Ⅰ integron genes were amplified by polymerase chain reaction. The results showed that the isolation rate of E. coli in laying ducks was 100%. The detection rates of virulence genes eae, ipa H, invE, aggR and pic of E. coli in the net bed dry-system were higher than those in the net bed with pool. For the drug-resistant phenotype, the proportion of strains with ≥3 resistance in E. coli in the net bed dry-system was 23.33%, while the proportion of strains with ≥3 in the net bed with pool was 10.00%. Similarly, the detection rates of the drug-resistant genes and the class Ⅰ integron genes in the net bed dry-system were also higher than those in the net bed with pool. Four of the 10 strains of class Ⅰ integron-positive E. coli carried the gene cassette insert, one of which derived from the E. coli class Ⅰ integron gene cassette of laying duck in the net bed with pool was dfrA12-aadA2, and the other three strains derived from the E. coli class Ⅰ integron gene cassette of laying duck in the net bed dry-system were dfrA1-aadA1. The above results indicate that the virulence gene carrying rate and drug resistance of E. coli in the intestinal tract of laying duck in the net bed dry-system are higher than those in the net bed with pool. It is suggested tha the changes of breeding mode may have some effect on the drug resistance characteristics of bacteria in waterfowls.

Key words: laying duck    Escherichia coli    drug-resistant phenotype    drug-resistant gene    virulence gene    class Ⅰ integron
收稿日期: 2019-03-28 出版日期: 2020-05-22
CLC:  S 834  
基金资助: 浙江省公益技术研究农业项目(2016C32078);浙江省农业科学院农产品质量安全国家重点实验室培育项目(2010DS700124-ZZ1905);浙江省温州市科技计划项目(X20170035);浙江省温州市农业丰收计划项目(FSJH2018011)
通讯作者: 肖英平     E-mail: yanzhao_wk@163.com;ypxiaozju@126.com
作者简介: 赵燕(https://orcid.org/0000-0002-4750-3129),Tel:+86-577-88413634,E-mail:yanzhao_wk@163.com
服务  
把本文推荐给朋友
加入引用管理器
E-mail Alert
RSS
作者相关文章  
赵燕
金俊杰
任敏敏
侯凤香
刘素贞
薛成俊
肖英平

引用本文:

赵燕,金俊杰,任敏敏,侯凤香,刘素贞,薛成俊,肖英平. 2种养殖模式下蛋鸭大肠埃希菌毒力基因和耐药特征分析[J]. 浙江大学学报(农业与生命科学版), 2020, 46(2): 254-262.

Yan ZHAO,Junjie JIN,Minmin REN,Fengxiang HOU,Suzhen LIU,Chengjun XUE,Yingping XIAO. Virulence genes and drug resistance characteristics of Escherichia coli in laying duck under the two different breeding modes. Journal of Zhejiang University (Agriculture and Life Sciences), 2020, 46(2): 254-262.

链接本文:

http://www.zjujournals.com/agr/CN/10.3785/j.issn.1008-9209.2019.03.281        http://www.zjujournals.com/agr/CN/Y2020/V46/I2/254

基因

Gene

GenBank序列号

GenBank accession number

引物序列(5′→3′)

Primer sequence (5′→3′)

产物长度

Product length/bp

eaeZ11541.1

F: ATTACCATCCACACAGACGGT

R: ACAGCGTGGTTGGATCAACCT

397
ipa HCP001064.1

F: TTGACCGCCTTTCCGATACC

R: ATCCGCATCACCGCTCAGAC

647
invEAF283289.1

F: CGATAGATGGCGAGAAATTATATCCCG

R: CGATCAAGAATCCCTAACAGAAGAATCAC

766
ltCP000795.1

F: GAACAGGAGGTTTCTGCGTTAGGTG

R: CTTTCAATGGCTTTTTTTTGGGAGTC

655
aggRZ18751.1

F: ACGCAGAGTTGCCTGATAAAG

R: AATACAGAATCGTCAGCATCAGC

400
picAF097644.1

F: AGCCGTTTCCGCAGAAGCC

R: AAATGTCAGTGAACCGACGATTGG

1 111
表1  毒力基因引物信息

基因

Gene

引物序列(5′→3′)

Primer sequence (5′→3′)

产物长度

Product length/bp

sulⅠ

F: TCACCGAGGACTCCTTCTTC

R: CAGTCCGCCTCAGCAATATC

331
sulⅡ

F: CCTGTTTCGTCCGACACAGA

R: GAAGCGCAGCCGCAATTCAT

435
qnrA

F: TTCAGCAAGAGGATTTCTCA

R: GGCAGCACTATTACTCCCAA

500
oqxB

F: TTCTCCCCCGGCGGGAAGTAC

R: CTCGGCCATTTTGGCGCGTA

512
qnrD

F: TTACGGGGAATAGAGTTA

R: AATCAGCCAAAGACCAAT

468
qnrS

F: ACATAAAGACTTAAGTGAC

R: CAATTAGTCAGGATAAAC

619
qepA

F: CCAGCTCGGCAACTTGATAC

R: ATGCTCGCCTTCCAGAAAA

570
floR

F: AACCCGCCCTCTGGATCAAGTCAA

R: CAAATCACGGGCCACGCTGTATC

548
cmlA

F: CGCCACGGTGTTGTTGTTAT

R: GCGACCTGCGTAAATGTCAC

394
ereA

F: AACACCCTGAACCCAAGGGACG

R: CTTCACATCCGGATTCGCTCGA

420
ermB

F: GAAAAGGTACTCAACCAAATA

R: AGTAACGGTACTTAAATTGTTTAC

639
mef

F: AGTATCATTAATCACTAGTGC

R: TTCTTCTGGTACTAAAAGTGG

348
tetC

F: TTGCGGGATATCGTCCATTC

R: CATGCCAACCCGTTCCATGT

831
tetB

F: CCCAGTGCTGTTGTTGTCAT

R: CCACCACCAGCCAATAAAAT

723
tetK

F: TCGATAGGAACAGCAGTA

R: CCGCAGATCCTACTCCTT

169
tetA

F: GCGCCTTTCCTTTGGGTTCT

R: CCACCCGTTCCACGTTGTTA

831
mecA

F: AAAATCGATGGTAAAGGTTGGC

R: AGTTCTGCAGTACCGGATTTGC

533
mecC

F: GAAAAAAAGGCTTAGAACGCCTC

R: GAAGATCTTTTCCGTTTTCAGC

533
aadA1

F: TATCCAGCTAAGCGCGAAC

R: ATTTGCCGACTACCTTGGT

447
pmrA

F: AGTTTTCCTCATTCGCGACCA

R: TACCAGGCTGCGGATGATATTCT

714
pmrB

F: GGATGGCCTGATGTGACGCTGTC

R: GCGCGGCTTTGGCTATATGCTG

1 312
cfr

F: TAAGAAGTAATAATGAGC

R: TATAGAAAGTCTACGAGG

518
mcr-1

F: CTCGGTCAGTCCGTTTGTTC

R: CTCGGCTTGGTCGGTCTGTA

316
表2  耐药基因引物信息

基因

Gene

引物

Primer

引物序列(5′→3′)

Primer sequence (5′→3′)

产物长度

Product length/bp

TEMTEM-FATGAGTATTCAACATTTCCGTG840
TEM-RTTACCAATGCTTAATCAGTGAG
SHVSHV-FATTTGTCGCTTCTTTACTCGC1 051
SHV-RTTTATGGCGTTACCTTTGACC
CTX-MCTX-M-FTTTGCGATGTGCAGTACCAGTAA544
CTX-M-RCGATATCGTTGGTGGTGCCATA
CTX-M-1-FAAAAATCACTGCGCCAGTTC415
CTX-M-1-RAGCTTATTCATCGCCACGTT
CTX-M-2-FCGACGCTACCCCTGCTATT552
CTX-M-2-RCCAGCGTCAGATTTTTCAGG
CTX-M-9-FCAAAGAGAGTGCAACGGATG205
CTX-M-9-RATTGGAAAGCGTTCATCACC
CTX-M-8-FTCGCGTTAAGCGGATGATGC666
CTX-M-25-FGCACGATGACATTCGGG327
CTX-M-8/25-RAACCCACGATGTGGGTAGC
表3  β-内酰胺酶基因引物信息
图1  eae毒力基因的PCR产物电泳结果M:DL5000标志物;NC:阴性对照;1~2:分离自网床水面圈养蛋鸭中的大肠埃希菌;3~4:分离自网床全旱养蛋鸭中的大肠埃希菌;PC:阳性对照。
图2  大肠埃希菌的毒力基因检出率
图3  网床水面圈养和网床全旱养蛋鸭中大肠埃希菌耐药菌株分布情况
图4  网床水面圈养和网床全旱养蛋鸭中大肠埃希菌耐药基因检出率
图5  CTX-M耐药基因的PCR产物电泳结果M:DL5000标志物;NC:阴性对照;1~2:分离自网床水面圈养蛋鸭中的菌株;3~4:分离自网床全旱养蛋鸭中的菌株;PC:阳性对照。
图6  ESBLs阳性大肠埃希菌β-内酰胺酶基因检出率
图7  大肠埃希菌的Ⅰ型整合子检出率
1 王雅鹏,陈娟,何朝秋,等.基于节能减排的水禽养殖模式选择问题探讨.中国家禽,2013,35(15):2-5.
WANG Y P, CHEN J, HE C Q, et al. Discussion on waterfowl rearing model based on energy saving and emission. China Poultry, 2013,35(15):2-5. (in Chinese)
2 傅秋玲,黄瑜,程龙飞,等.不同养殖模式蛋鸭疫病的检测与分析.中国兽医杂志,2017,53(3):6-9.
FU Q L, HUANG Y, CHENG L F, et al. Detection and analysis for the epidemic diseases of laying ducks in different breeding models. Chinese Journal of Veterinary Medicine, 2017,53(3):6-9. (in Chinese with English abstract)
3 贺丹丹,黄良宗,陈孝杰,等.不同动物源大肠杆菌的耐药性调查.中国畜牧兽医,2013,40(10):211-215.
HE D D, HUANG L Z, CHEN X J, et al. Investigation of antibiotic resistance among Escherichia coli isolated from different animals. China Animal Husbandry and Veterinary Medicine, 2013,40(10):211-215. (in Chinese with English abstract)
4 宋立,宁宜宝,沈建忠,等.中国不同年代食品动物大肠杆菌耐药性调查研究.中国科学(C辑:生命科学),2009,39(7):692-698.
SONG L, NING Y B, SHEN J Z, et al. Investigation on antibiotic resistance of Escherichia coli from food in different years in China. Science in China Series C: Life Science, 2009,39(7):692-698. (in Chinese)
5 LIM S K, LEE H S, NAM H M, et al. Antimicrobial resistance observed in Escherichia coli strains isolated from fecal samples of cattle and pigs in Korea during 2003—2004. International Journal of Food Microbiology, 2007,116(2):283-286.
6 张济培,韦庆兰,谭华龙,等.广东省水禽源大肠杆菌I型整合子的检测分析.中国兽医学报,2016,36(7):1119-1122. DOI:10.16303/j.cnki.1005-4545.2016.07.08
ZHANG J P, WEI Q L, TAN H L, et al. Investigation on class I integrons gene cassettes of Escherichia coli from waterfowl in Guangdong Province. Chinese Journal of Veterinary Science, 2016,36(7):1119-1122. (in Chinese with English abstract)
doi: 10.16303/j.cnki.1005-4545.2016.07.08
7 肖根辉,孙浩,何后军,等.鹅致病性大肠杆菌耐药性与整合子研究.中国预防兽医学报,2012,34(10):790-792. DOI:10.3969/j.issn.1008-0589.2012.10.08
XIAO G H, SUN H, HE H J, et al. The research on integrons and drug resistance of the pathogenic E. coli from goose. Chinese Journal of Preventive Veterinary Medicine, 2012,34(10):790-792. (in Chinese with English abstract)
doi: 10.3969/j.issn.1008-0589.2012.10.08
8 郭磊,李开锋,王述柏,等.山东地区鸭源大肠杆菌耐药性分析.中国兽医杂志,2018,54(2):87-88.
GUO L, LI K F, WANG S B, et al. Analysis on drug resistance of duck-derived Escherichia coli in Shandong Province. Chinese Journal of Veterinary Medicine, 2018,54(2):87-88. (in Chinese with English abstract)
9 国家卫生和计划生育委员会,国家食品药品监督管理总局.食品安全国家标准 食品微生物学检验 致泻大肠埃希氏菌检验:GB 4789.6—2016.北京:中国标准出版社,2017.
National Health and Family Planning Commission of the People’s Republic of China, China Food and Drug Adminis-tration. National Food Safety Standard: Food Microbiological Analysis: Detection of Diarrhea-causing Escherichia Coli: GB 4789.6—2016. Beijing: Standards Press of China, 2017. (in Chinese)
10 SANDVANG D, ARESTRUP F M, JENSEN L B. Characterization of integrons and antibiotic resistance genes in Danish multiresistant Salmonella enterica Typhimutium DT104. FEMS Microbiology Letters, 1997,157:177-181. DOI:10.1111/j.1574-6968.1997.tb12770.x
doi: 10.1111/j.1574-6968.1997.tb12770.x
11 王佩佩,杨华,戴贤君,等.家禽屠宰场环境和屠宰器械表面微生物菌群结构和耐药基因分析.浙江农业学报,2018,30(7):1249-1258. DOI:10.3969/j.issn.1004-1524.2018.07.20
WANG P P, YANG H, DAI X J, et al. Microbial community structure and drug resistance gene on water, ground and surface of slaughtering equipment in poultry slaughterhouse. Acta Agriculturae Zhejiangensis, 2018,30(7):1249-1258. (in Chinese with English abstract)
doi: 10.3969/j.issn.1004-1524.2018.07.20
12 XI M L, WU Q, WANG X, et al. Characterization of extended-spectrum β-lactamases-producing Escherichia coli strains isolated from retail foods in Shanxi Province, China. Journal of Food Protection, 2015,78(5):1018-1023. DOI:10.4315/0362-028x.jfp-14-490
doi: 10.4315/0362-028x.jfp-14-490
13 钟贞,马永平,邱宗荫,等.肠产毒性大肠埃希菌定植因子研究进展.医学分子生物学杂志,2004,1(1):51-54.
ZHONG Z, MA Y P, QIU Z Y, et al. Advances in the research on colonization factors of enterotoxigenic E. coli. Journal of Medical Molecular Biology, 2004,1(1):51-54. (in Chinese with English abstract)
14 SOUFI L, SAENZ Y, VINUE L, et al. Escherichia coli of poultry food origin as reservoir of sulphonamide resistance genes and integrons. International Journal of Food Microbiology, 2011,144(3):497-502. DOI:10.1016/j.ijfoodmicro.2010.11.008
doi: 10.1016/j.ijfoodmicro
15 邓伯雄,刘情,邓安元,等.鸭致病性大肠杆菌分离鉴定及其相关致病性分析.中国畜牧兽医,2016,43(1):235-241. DOI:10.16431/j.cnki.1671-7236.2016.01.034
DENG B X, LIU Q, DENG A Y, et al. Isolation, identification and related pathogenicity analysis of duck pathogenic E. coli. China Animal Husbandry and Veterinary Medicine, 2016,43(1):235-241. (in Chinese with English abstract)
doi: 10.16431/j.cnki.1671-7236.2016.01.034
16 GALAS M, DECOUSSER J W, BRETON N, et al. Nationwide study of the prevalence, characteristics, and molecular epidemiology of extended-spectrum-beta-lactamase-producing Enterobacteriaceae in France. Antimicrobial Agents and Chemotherapy, 2008,52(2):786-789. DOI:10.1128/aac.00906-07
doi: 10.1128/aac
17 TAMANG M D, NAM H M, JANG G C, et al. Molecular characterization of extended-spectrum-β-lactamase-producing and plasmid-mediated AmpC β-lactamase-producing Escherichia coli isolated from stray dogs in South Korea. Antimicrobial Agents and Chemotherapy, 2012,56(5):2705-2712. DOI:10.1128/aac.05598-11
doi: 10.1128/aac.05598-11
18 PFEIFER Y, CULLIK A, WITTE W. Resistance to cephalosporins and carbapenems in Gram-negative bacterial pathogens. International Journal of Medical Microbiology, 2010,300(6):371-379. DOI:10.1016/j.ijmm.2010.04.005
doi: 10.1016/j.ijmm.2010.04.005
19 吴华,裴亚玲,刘建华,等.鸭大肠杆菌超广谱β-内酰胺酶检测(ESBLs)及药物敏感性测定.安徽农业大学学报,2008,35(3):462-468. DOI:10.13610/j.cnki.1672-352x.2008.03.032
WU H, PEI Y L, LIU J H, et al. Determination of ESBLs and antibiotics susceptibility test analysis for avian pathogenic Escherichia coli from the disease duck. Journal of Anhui Agricultural University, 2008,35(3):462-468. (in Chinese with English abstract)
doi: 10.13610/j.cnki.1672-352x.2008.03.032
20 刘保光,肖尚修,吴华,等.鸭大肠杆菌超广谱β-内酰胺酶的检测及药物敏感性分析.中国畜牧兽医,2010,37(9):188-191.
LIU B G, XIAO S X, WU H, et al. The ESBLs detection of duck E.coli and drug susceptibility analysis. China Animal Husbandry and Veterinary Medicine, 2010,37(9):188-191. (in Chinese with English abstract)
21 BENNETT P M. Plasmid encoded antibiotic resistance: acquisition and transfer of antibiotic resistance genes in bacteria. British Journal of Pharmacology, 2008,153(Suppl. 1):S347-S357. DOI:10.1038/sj.bjp.0707607
doi: 10.1038/sj.bjp.0707607
[1] 梁思源, 王越珉, 胡松华. 头孢噻呋纳米乳的制备及其抗奶牛乳腺炎主要致病菌的研究[J]. 浙江大学学报(农业与生命科学版), 2018, 44(2): 247-252.
[2] 向玉勇,张云,殷培峰,朱萍. 大肠埃希菌感染后金银花尺蠖幼虫血细胞的变化[J]. 浙江大学学报(农业与生命科学版), 2016, 42(2): 163-168.
[3] 杨黎, 汪海珍, 姚志远, 吴建军. 大肠埃希菌O157:H7植物组织内生化研究概况[J]. 浙江大学学报(农业与生命科学版), 2015, 41(1): 82-88.
[4] 马孟根  王红宁  余勇  张东  刘世贵 . 沙门氏菌耐药基因检测芯片的构建[J]. 浙江大学学报(农业与生命科学版), 2006, 32(6): 638-644.
[5] 卢立志  陈海燕  傅衍  周卫东  陶争荣. Wood模型拟合鸭产蛋曲线效果的研究[J]. 浙江大学学报(农业与生命科学版), 2002, 28(4): 423-426.
[6] 陈有亮 杨玉爱. 高锌饲粮对蛋鸭产蛋性能蛋锌含量以及蛋品质的影响[J]. 浙江大学学报(农业与生命科学版), 2000, 26(2): 173-176.