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Biological sciences & biotechnology
Identification and physiological characterization of thermotolerant rice genotypes
ZHOU Weihui,XUE Dawei,ZHANG Guoping
, 2012, 38(1): 1-9.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.001
Abstract( 2310 )   HTML (   PDF(937KB)( 3053 )
The experiments were conducted to identify thermo‐tolerant rice genotypes and characterize physiological traits relevant to heat stress tolerance . Seventy‐two rice genotypes were exposed to high temperature (40 ℃ /35 ℃ , 14 h/10 h) for 12 d at heading stage , and floret fertility was examined . The similar results were obtained in the two years?experiments that there was a distinctly genotypic difference in floret fertility as affected by heat stress . When rice seedlings were exposed to heat stress , chlorophyll content (SPAD value) , plant height , root length , shoot and root biomass were dramatically reduced , with thermo‐tolerant genotypes being relatively less affected than sensitive ones . Meanwhile ,high temperature enhanced membrane lipid peroxidation , as expressed by malondialdehyde content and increased superoxide dismutase (SOD) activity . Thermo‐tolerant genotypes had less and more increase in MDA content and SOD activity than sensitive ones under heat stress relative to the control , respectively .Accordingly the thermo‐tolerant genotypes were identified , with genotypes CJ6 , MY46 and JX17 being highly thermo‐tolerant , MH63 , Kasalath and IRAT4217 being very sensitive .
Establishment of a suitable control vector for Tobacco rattle virusinduced gene silencing analysis inNicotiana benthamiana
CHENG Weishun,XU Qiufang,LI Fei,XU Youping,CAI Xinzhong
, 2012, 38(1): 10-20.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.002
Abstract( 2101 )   HTML (   PDF(2070KB)( 3018 )
Effects of the empty pYL156 vector ( pYL156 ∷ 00 ) , the most commonly used control vector for Tobacco rattle v irus ( TRV )‐induced gene silencing analysis on viral symptom development and growth of VIGS‐treated tomato and N icotiana benthamiana plants were investigated . It was shown that VIGS‐treatment for pYL156 ∷ 00 caused severe systemic viral symptoms and obvious growth repression in treated plants . Therefore , pYL156 ∷ 00 is not a good control vector for TRV‐induced gene silencing analysis in these plant species . To set a better control for this analysis , two new constructs ,pYL156 ∷ N IRi and pYL156 ∷ eG FP , were made . They were released by inserting a 253 bp fragment of a Phaseolus vulgaris nitrite reductase gene intron and a 400 bp fragment of the jellyfish GFP coding
sequence in pYL156 ∷ 00 , respectively . Effects of the two new control constructs on viral symptom development and growth of VIGS‐treated N . benthamiana plants were compared with pYL156 ∷ 00 . The results showed that VIGS‐treatment for pYL156 ∷ 00 caused severe systemic viral symptoms and significant growth repression in treated plants , resulting in death of 26.7% plants . VIGS‐treatment for pYL156 ∷ N IRi also led to obvious viral symptoms and growth repression , but in a less severe extent than that for pYL156 ∷ 00 , resulting in death of 13.3% plants . However , VIGS‐treatment for pYL156 ∷ eG FP did not cause any obvious viral symptom and growth repression . Severity of viral symptom and growth repression was well correlated with the accumulation level of TRV virus . These results demonstrate that pYL156 ∷ eG FP is an excellent control vector for TRV‐induced gene silencing analysis , and provide some insights into the direction to establish an excellent control for VIGS analysis .
Functional analysis of an ubiquitin fusion degradation protein gene UFD1 in regulation of plant disease andstress resistance
LAI Yi yu,LI Fei,XU You ping,CAI Xin zhong
, 2012, 38(1): 21-27.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.003
Abstract( 1841 )   HTML (   PDF(1314KB)( 1559 )
 A fragment of ubiquitin fusion degradation protein (UFD) gene UFD1 was cloned from tomato
by reverse transcription‐polymerase chain reaction (RT‐PCR) , and its role in regulation of plant disease
and stress resistance was analyzed employing virus‐induced gene silencing (VIGS) technique . The results
showed that the silencing of UFD1 in N icotiana benthamiana resulted in significantly weakening of
hypersensitive response ( HR) mediated by C f‐4/ A v r4‐ and C f‐9/A v r9 and induced by X anthomonas
oryz ae pv . oryz ae (Xoo) , alleviating of necrotic symptoms of tobacco wild fire disease , decreasing of
chlorophyll content in leaves under stress of high concentration of salt , but did not lead to change of
symptoms of white mould disease caused by Sclerotinia sclerotiorum and resistance to drought stress . It is indicated that UFD1 is a pivotal regulator of plant disease and stress resistance , playing roles in
positive regulation of C f‐4‐ and C f‐9‐dependent gene‐for‐gene resistance , nonhost resistance to Xoo and
salt tolerance , and in contrast , negative regulation of resistance to tobacco wild fire disease .
Analysis of differentially expressed genes of Rhizoctonia solani during the sclertium formation
CHEN Xiao yao,WANG Wei,WANG Zheng yi,CHEN Wei liang
, 2012, 38(1): 28-34.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.004
Abstract( 1480 )   HTML (   PDF(4796KB)( 1435 )
 Subtractive cDNA library of differentially expressed genes during the sclertium formation of
Rhizoctonia solani , GD‐118 strain , was constructed by using suppression subtractive hybridization
(SSH) technique combined with virtual Northern blot . The hypha mRNA was used as the driver and the
sclertium mRNA was applied as the tester . Further PCR screening showed that the size of the inserts
was mainly between 200 to 500 bp . The effectiveness of the subtractive hybridization was verified by
virtual Northern blot of colonies randomly selected using hypha , sclertium cDNA sequence as probes .
Finally , 28 specific sclertium formation‐related gene fragments were obtained after sequencing and
homology‐blasting , which were mainly related to stress response , transcription regulation , signal
transduction and metabolism in the pathogen . Results above provide scientific clues to understand the
mechanism of the sclertium formation of R . solani .
Cloning and expression analysis of pathogenesis‐related protein 1 gene in maize
WANG Jing,LIU Li,ZHANG Zhiming,ZHAO Maojun,PAN Guangtang
, 2012, 38(1): 35-42.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.005
Abstract( 1876 )   HTML (   PDF(6490KB)( 1756 )
 By reverse transcription‐polymerase chain reaction ( RT‐PCR) , an open reading frame of pathogenesis‐related protein 1 ( PR1 ) was isolated from inbred line R15 which was resistant to kernel rot , named ZmPR1 .Molecular and bioinformatic analyses of ZmPR1 revealed that an open reading frame
of 528 bp was predicted to encode a 175‐amino acid protein with a deduced molecular mass of 18 .7 ku .Homology analysis showed that the deduced amino acid sequence of PR1 protein in maize had a high similarity with other higher plants , such as Oryz a sativ a , T riticum aestivum , and A rabidopsis . PR1 proteins from different plants had the same conservative structure domain of cysteine‐rich secretory protein (CAP) . The recombinant expressed plasmid pET32a( + )‐ZmPR1 was expressed in Escherichia coli BL21 . The expression conditions were optimized by induction at different time , different temperature , and different IPTG concentrations . The results indicated that the expression products migrated at the size of 39 ku by sodium dodecyl sulfate‐polyacrylamide gel electrophoresis (SDS‐PAGE) and Western blot analysis . The optimum expression condition was 0 .6 mmol.L-1 IPTG at 28 ℃ ,but the induction time has little effect on the expression . The successful expression of ZmPR1 provides some
basis for protein purification and preparation of the monoclonal antibody .
Construction of an inducible expression vector based on αgalactosidase gene as a selection marker forSaccharomyces cerevisiae and its application
ZHANG Wei,GUO Qin,RUAN Hui,HE Guo qing
, 2012, 38(1): 43-47.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.006
Abstract( 1513 )   HTML (   PDF(875KB)( 1570 )
YGM‐α‐gal , an expression vector for Saccharomyces cerev isiae , was constructed containing α‐
galactosidase gene as selection marker and an inducible GAL1 promoter . The β‐1 ,3‐1 ,4‐glucanase gene
cloned from Bacillus subtilis was inserted into the multiple cloning sites of the plasmid YGM‐α‐gal to
generate YGMPA‐α‐gal , then to transform the host yeast , and β‐1 ,3‐1 ,4‐glucanase was efficiently
expressed as a secretive protein in S . cerev isiae . The results indicated that the β‐1 ,3‐1 ,4‐glucanase
activity in the ferment liquid in shake flask was about 411.9 U.mL -1 after adding 2% galactose for 24 h ,
and the α‐galactosidase activity reached 64.2 U.mL -1 after adding 2% galactose for 60 h . So the α‐
galactosidase gene can be used as an effective selection marker for screening the positive transformants of
food‐grade yeast expression system .
Expression of IFN‐γ protein and mRNA in lung and trachea of macaque infected with Streptococcus pneumoniae .
LUO Qi hui,ZHANG Yao,CHEN Lian,CHEN Zheng li,ZENG Wen,CHENG An chun
, 2012, 38(1): 48-54.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.007
Abstract( 1364 )   HTML (   PDF(2849KB)( 830 )
To investigate the expression and distribution of interferon‐γ ( IFN‐γ) in lung and trachea of macaques infected with Streptococcus pneumoniae , the histopathological changes of macaques?lung and trachea were studied by using hematoxylin‐eosin ( HE) stain , where the expression of IFN‐γ was researched by immunohistochemistry and in situ hybridization . The results showed that a large area of lung was hyperemic and hemorrhagic , and there was lymphocytic infiltration in lung and some serous
exudate in alveolar septum . The area of IFN‐γ protein expression in infected macaques was higher than healthy group ( P < 0.05) .The optical density of IFN‐γ protein in pulmonary intravascular space was significantly higher than that of healthy group ( P <0.01) , and the optical density in other tissues was higher than that of healthy group ( P <0.05 ) . The optical densities of IFN‐γ mRNA in lung , tracheal epithelium and muscular layer were significantly higher than those of healthy group ( P < 0.01) , while in alveolar septum , lumen of blood vessel and lamina propria of tracheal were higher than those of healthy group ( P <0.05 ) . As a result , the lung presented significant red hepatization in infected macaques , and the expression of IFN‐γ protein and mRNA in lung and trachea increased significantly ,
indicating that IFN‐γ might play an important role in immunoloregulation of macaques?lung and trachea infected by S . pneumoniae .
Effects of banana wilt disease on soil nematode community structure and diversity
ZHONG Shuang,HE Ying dui,HAN Li na,ZENG Hui cai,JIN Zhi qiang
, 2012, 38(1): 55-62.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.008
Abstract( 1572 )   HTML (   PDF(598KB)( 1009 )
To investigate the effect of pathogen causing banana wilt disease on soil ecosystem health , the differences of soil nematode trophic groups and ecological indices between banana wilt disease soil and control soil were compared in Hainan Province using soil nematode as bioindicator . The results showed that 31 nematode genera in the disease area and control area were identified , 26 of which was in disease area , 28 in control area . The abundance of total nematodes , bacterivore in 10‐30 cm soil layer and plant parasites and the values of Shannon‐Wiener diversity index ( H′) , maturity index (MI) , structure index (SI) and enrichment index ( EI) were significantly lower ( P < 0.01 ) in the disease area than in the control area , while those of fungivores and Simpson?s dominance index ( λ) exhibited quite a reverse condition . The abundance of total nematodes and bacterivore decreased ( P <0.01) while those of plant parasites and the values of SI increased ( P <0.01 ) with increasing soil depth in the disease area . The abundance of total nematodes and plant parasites decreased ( P <0.05) and the values of SI ( P <0.01)
increased with increasing soil depth in the control area . It is indicated that pathogen causing banana wilt disease changed soil nematode community structure and decreased diversity of soil nematode community .
Agricultural sciences
Progress in potential toxicity of chiral pesticides
LIU Wei ping,ZHANG Ying
, 2012, 38(1): 63-70.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.009
Abstract( 1490 )   HTML (   PDF(262KB)( 2001 )
 In the past , chiral pesticides were explored as racemic mixtures in environmental fate and ecotoxicities . However , as a result of the enantioselective interactions with chiral molecules , the enantiomers of chiral pesticides may have different potential toxicities to humans and animals . The present review introduced recent findings on enantioselective endocrine disruption , neurotoxicity ,immunotoxicity , reproductive and developmental toxicity of organophosphorus , organochlorines ,pyrethroids and phenylpyrazole pesticides , as well as the underlying mechanisms . Furthermore , the developmental trends of future investigations were discussed .
Concentrations and variations of total N, available P and K of cultivated soils in Zhejiang Province, China
MA Wanzhu,ZHANG Mingkui,L Xiaonan
, 2012, 38(1): 71-80.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.010
Abstract( 1516 )   HTML (   PDF(258KB)( 857 )
Total N , available P and K of cultivated soils from 11 districts of Zhejiang Province were investigated.Statistical results showed that the average soil total N and available K decreased , and the average soil available P increased , as compared with those obtained at 1980s.The cultivated soil samples with low levels of soil total N ( <1g.kg -1 ) , available P ( < 10 mg.kg -1 ) and K ( < 80 mg.kg -1 )accounted for 13.90% , 44.80% and 48.17% of total soil samples , respectively.The proportion of soil samples with deficiency of one of N , P , and K was as high as 73.79% .There were imbalances among soil N , P and K.Great variations in concentrations of soil total N , available P and K were found.The variation coefficients of soil total N , available P and K decreased in the order of available P ( 192% ) >available K (71% ) > total N (39% ).Soil total N was correlated positively with organic matter , and decreased in the order of clayey soil > clay‐loamy soil > loamy soil > sandy soil , and in the order of hydrographic net plain > river plain > hilly area > coastal plain.Soil available P increased with decreasing pH ,and decreased in the order of sandy soil > loamy soil > clay loamy soil ,clayey soil , and in the order of high hilly area , coastal plain > river plain , low hilly area > hydrographic net plain.Soil available K was related to pH , texture , and geomorphic type , and decreased with decreasing pH.The available K decreased in the order of clayey soil > clay loamy soil > loamy soil > sandy soil , and in the order of coastal plain > hydrographic net plain > river plain > low hilly area > high hilly area.
Resource & environmental sciences
Contents of black carbon in some surface dusts from Zhejiang Province
HUANG Jia ming,WANG Xiao xu,WANG Yang,ZHANG Ming kui
, 2012, 38(1): 81-90.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.012
Abstract( 1480 )   HTML (   PDF(399KB)( 1187 )
To understand the effects of human activity on accumulation of black carbon in surface dusts ,174 of surface dust samples were collected from Zhejiang Province . The surface dust samples were taken from different areas which included indoor in countryside , outdoor in countryside , manufacture with coal as fuels , coach station , indoor in urban residential area , outdoor in urban residential area , and office room . The contents of black carbon in the surface dust samples were characterized by chemical method .The results showed that the contents of black carbon in the dusts varied greatly with variation coefficient of 61.04 % , and ranged from 1.47 to 25.47g.kg -1 , and averaged 9.24g.kg -1 . Most of the samples(45.98% ) had black carbon contents ranging from 5 to 10 g.kg -1 . Mean contents of black carbon in the surface dusts from different areas decreased in the sequence of indoor in countryside > manufacture with coal as fuels > coach station > outdoor in countryside > outdoor in urban residential area > indoor in urban residential area > office room . The proportion of black carbon in total organic carbon ranged from14.35% to 63.47% with mean of 40.55% , and decreased in the sequence of coach station >manufacture with coal as fuels > outdoor in urban residential area > indoor in urban residential area >office room > indoor in countryside > outdoor in countryside .Correlation analysis showed that contents of black carbon in the dusts were positively and significantly correlated with its total organic carbon .Black carbon content of surface dusts was generally higher than that of soils , and lower than that of
aerosol . The proportions of black carbon in the dust total organic carbon were also higher than those of soils . The results above suggest that the surface dusts can be a source of black carbon in environments in earth .
Characteristics of phosphorus sorption kinetics on sediments at different initial phosphorus concentrations
HUANG Li dong,CHAI Ru shan,ZONG Xiao bo,ZHANG Yong song
, 2012, 38(1): 91-97.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.011
Abstract( 1622 )   HTML (   PDF(1036KB)( 1524 )
Two different sediments ( Meiliangwan and Huajiachi) were selected to study the effect of initial P concentration ( C ) on P sorption kinetics and to identify the corresponding sorption kinetic type . Kinetics studies were carried out using an agitated batch method . The kinetics of sorption were followed based on the amounts of P adsorbed at various time intervals . The data were analyzed using pseudo‐first order and pseudo‐second order equations . The results showed that : 1) for the Meiliangwan sediment ,the process belonged to a two‐stage dynamic : an initial fast exchange of P followed by a much slower process , and its sorption quantity was much larger than that of the Huajiachi sediment , which could be seen as chemical sorption . For the Huajiachi sediment , the sorption process was slow and had a small
absorbing capacity , which belonged to physical sorption , and the data points fluctuated greatly ; 2) the zero equilibrium P concentration (EPC ) in the Meiliangwan and Huajiachi sediments was 0.03 and 0.42mg.L -1 , respectively . When C < EPC , the sediment desorbed P , or else the sediment adsorbed P ;3) the sorption data in the Meiliangwan and Huajiachi sediment followed pseudo‐second order and pseudo‐first order kinetic model respectively by investigating the theoretical criteria and comparing standard residual error and correlation coefficient ; 4) the sorption quantity and sorption rate of sediments increased with increasing C . Besides , the higher the C value was , the longer time was required to achieve equilibrium . From the relationship between Cand kinetic parameters , generalized predictive models for P adsorbed onto sediments at any contact time and initial P concentration within the given range were proposed . These equations could then be used to derive the amount of P adsorbed at any givenion concentration and the reaction time . It will be helpful to understand the P transfer differences between sediments .
Greenhouse gas emissions from major agricultural activities in China and corresponding mitigation strategies .
ZHANG Yong song,CHAI Ru shan,FU Lili,LIU Li juan,DONG Hui fen
, 2012, 38(1): 97-107.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.013
Abstract( 1683 )   HTML (   PDF(386KB)( 1742 )
In recent years , the issue of large amounts of greenhouse gas emissions and greenhouse effect induced by them has already aroused people?s great attention . Reducing greenhouse gas emission has become an urgent problem , which should be solved as soon as possible . CO , CH and NO are the major greenhouse gases , which play very important role in global warming . Agriculture is one of the most important greenhouse gases (CH and NO) emission sources . For the purpose of making a positive contribution in reducing China?s greenhouse gas emission and relieving global warming , several controlling methods for reducing greenhouse gas emissions in Chinese agriculture were elaborated from the following aspects : reducing CH emission from the rice fields and ruminant animals , utilization of
agricultural organic wastes for CO2 fertilization for the purpose of avoiding CH and NO emissions during the process of straw burning and animal manure random dumping , as well as the adjustment of application methods of nitrogen fertilizer for reducing NO emission from the soil .
Cu fractions, accumulation and bioavailability in black soil rice system affected by application of pig manures
MA Rong hui,ZHU Rui,ZONG Yu tong,LU Sheng gao
, 2012, 38(1): 108-118.   https://doi.org/10.3785/j.issn.1008-9209.2012.01.014
Abstract( 1559 )   HTML (   PDF(1707KB)( 1234 )
Pot experiments were conducted to examine the copper (Cu) fractions , mobility , availability and uptake by rice in black soil affected by application of pig manure (PM).The results indicated that Cu was predominately distributed in organic and residual‐bound fractions ,while the percentages of carbonate and organic‐bound fractions increased with increasing Cu concentrations in soil.The application of PM at the rate of 1% significantly reduced the DW (deionied water)‐ and DTPA‐extractable Cu ( P <0.01) ,but the increase in the amounts of TCLP (toxicity characteristics leaching procedure) ‐extractable Cu was not significant.The application of PM at the rate of 1% significantly declined the Cu mobility ,effectively transformed soil Cu from soluble fractions to stable forms , but application of PM at the rate of3% exhibited the opposite effect. The uptake of Cu by rice was very low compared with quantities accumulated in soil , however Cu concentrations in grains approached threshold level (GB 15199‐1994 ,Cu ≤ 10 mg.kg-1 ) after Cu application of ≥ 400 mg.kg -1 in soil.The application of PM at the rate of1% significantly reduced Cu concentrations in rice plant tissues ( P <0.01).The results also suggested that pig manure application with moderate Cu enrichment could decline Cu bioavailability in Cu contaminated soil , but long‐term and excessive amount of PM had a phototoxic effect and presented a potential threat to human health.Therefore , much attention should be paid regarding application of pig manures with high amount Cu for environmental and food safety.
14 articles