Crop sciences |
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Cloning and expression analysis of OsSPL3 promoter in rice |
Huiling ZENG1(),Zuyi MO1,Qiaoxian PU1,Jiashu WANG1,Kai FAN2,Zhaowei LI1() |
1.College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China 2.College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China |
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Abstract OsSPL transcription factor plays an important role in the development and stress response of rice (Oryza sativa) roots, leaves, floral organs, and ears. In this study, the OsSPL3 promoter was analyzed to explore the expression pattern of OsSPL3 transcription factor in rice and its response to drought stress. The Cis-acting elements in the OsSPL3 promoter region were analyzed by PLACE and Plant CARE online softwares, and the recombinant expression vector of OsSPL3 promoter and β-glucuronidase(GUS) gene was constructed, which was transformed into ZH11 rice callus, and positive transgenic plants were obtained by screening. The GUS expression activity of pOsSPL3-GUS transgenic plants and the expression patterns under drought stress and abscisic acid (ABA) treatments were detected. The results of promoter analysis showed that in addition to the necessary transcription initiation core elements and light-responsive elements, the OsSPL3 promoter region also included three MYB-involved drought-inducible elements, three gibberellin-responsive elements, two anaerobic induction essential elements, one low temperature response element, one endosperm expression regulatory element, one zein metabolism regulatory element and one meristem expression-related regulatory element. The results of GUS staining showed that the expression activity of GUS gene in young leaves, stem sheaths, coleoptiles and other young tissues was high, as well as in the vigorous growth parts of roots such as root cap, meristem zone, and elongation zone. In addition, the drought stress could significantly enhanced the GUS activity of transgenic rice leaves and roots. It shows that OsSPL3 transcription factor plays a regulatory role in the process of coleoptile growth, new leaf formation, root extension and stem sheath elongation after seed germination, and OsSPL3 transcription factor is also involved in the response process of rice drought stress.
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Received: 09 May 2022
Published: 25 June 2023
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Corresponding Authors:
Zhaowei LI
E-mail: 18349325508@163.com;lizw197@163.com
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水稻OsSPL3启动子克隆及表达分析
OsSPL转录因子在水稻(Oryza sativa)根系、叶片、花器官、穗等发育与逆境响应过程中起重要作用。本文通过对OsSPL3启动子的分析,探究了OsSPL3转录因子在水稻中的表达模式及其对干旱胁迫的响应方式。利用PLACE和Plant CARE在线软件分析OsSPL3启动子区的顺式作用元件,并构建OsSPL3启动子与β-葡糖醛酸糖苷酶(β-glucuronidase, GUS)基因的重组表达载体,转化‘中花11’(ZH11)水稻愈伤组织,筛选获得阳性转基因植株,且对pOsSPL3-GUS转基因植株的GUS表达活性以及在干旱胁迫与脱落酸(abscisic acid, ABA)处理下的表达方式进行检测。启动子分析结果表明,OsSPL3启动子区除包含必要的转录起始核心元件与光响应元件外,还包括3个MYB参与的干旱诱导元件、3个赤霉素响应元件、2个厌氧诱导必需作用元件、1个低温响应作用元件、1个胚乳表达调控元件、1个玉米醇溶蛋白代谢调控元件和1个分生组织表达相关调控元件。GUS染色结果显示,GUS基因在新生叶片、茎鞘、胚芽鞘等幼嫩组织及根冠、分生区、伸长区等根系旺盛生长部位中表达活性较高。此外,干旱胁迫能明显增强转基因水稻叶片与根系的GUS活性。本研究结果表明,OsSPL3转录因子在水稻种子萌发后的胚芽鞘生长、新叶发生、根系延伸等器官发育与茎鞘伸长等过程中发挥调控作用,同时,OsSPL3转录因子还参与水稻干旱胁迫响应过程。
关键词:
水稻,
OsSPL3转录因子,
启动子,
β-葡糖醛酸糖苷酶,
干旱胁迫
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[1] |
陈开,唐瑭,张冬平,等.生长素和细胞分裂素参与构建水稻根系的研究进展[J].植物生理学报,2020,56(12):2495-2509. DOI:10.13592/j.cnki.ppj.2020.0398 CHEN K, TANG T, ZHANG D P, et al. Recent advances in auxin-cytokinin interactions involved in shaping architecture of rice root system[J]. Plant Physiology Journal, 2020, 56(12): 2495-2509. (in Chinese with English abstract)
doi: 10.13592/j.cnki.ppj.2020.0398
|
|
|
[2] |
郭韬,余泓,邱杰,等.中国水稻遗传学研究进展与分子设计育种[J].中国科学(生命科学),2019,49(10):1185-1212. DOI:10.1360/SSV-2019-0209 GUO T, YU H, QIU J, et al. Advances in rice genetics and breeding by molecular design in China[J]. Scientia Sinica Vitae, 2019, 49(10): 1185-1212. (in Chinese with English abstract)
doi: 10.1360/SSV-2019-0209
|
|
|
[3] |
CHEN X B, ZHANG Z L, LIU D M, et al. SQUAMOSA promoter-binding protein-like transcription factors: star players for plant growth and development[J]. Journal of Integrative Plant Biology, 2010, 52(11): 946-951. DOI: 10.1111/j.1744-7909.2010.00987.x
doi: 10.1111/j.1744-7909.2010.00987.x
|
|
|
[4] |
LAN T, ZHENG Y L, SU Z L, et al. OsSPL10, a SBP-box gene, plays a dual role in salt tolerance and trichome formation in rice (Oryza sativa L.)[J]. Genes, Genomes, Genetics (G3), 2019, 9(12): 4107-4114. DOI: 10.1534/g3.119.400700
doi: 10.1534/g3.119.400700
|
|
|
[5] |
LEE J W, PARK J J, KIM S L, et al. Mutations in the rice liguleless gene result in a complete loss of the auricle, ligule, and laminar joint[J]. Plant Molecular Biology, 2007, 65(4): 487-499. DOI: 10.1007/s11103-007-9196-1
doi: 10.1007/s11103-007-9196-1
|
|
|
[6] |
YANG R X, LI P C, MEI H L, et al. Fine-tuning of MiR528 accumulation modulates flowering time in rice[J]. Molecular Plant, 2019, 12(8): 1103-1113. DOI: 10.1016/j.molp.2019.04.009
doi: 10.1016/j.molp.2019.04.009
|
|
|
[7] |
SI L Z, CHEN J Y, HUANG X H, et al. OsSPL13 controls grain size in cultivated rice[J]. Nature Genetics, 2016, 48(4): 447-456. DOI: 10.1038/ng.3518
doi: 10.1038/ng.3518
|
|
|
[8] |
WANG S K, WU K, YUAN Q B, et al. Control of grain size, shape and quality by OsSPL16 in rice[J]. Nature Genetics, 2012, 44(8): 950-954. DOI: 10.1038/ng.2327
doi: 10.1038/ng.2327
|
|
|
[9] |
WANG S K, LI S, LIU Q, et al. The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality[J]. Nature Genetics, 2015, 47(8): 949-954. DOI: 10.1038/ng.3352
doi: 10.1038/ng.3352
|
|
|
[10] |
YUAN H, QIN P, HU L, et al. OsSPL18 controls grain weight and grain number in rice[J]. Journal of Genetics and Genomics, 2019, 46(1): 41-51. DOI: 10.1016/j.jgg.2019.01.003
doi: 10.1016/j.jgg.2019.01.003
|
|
|
[11] |
HUANG X Z, QIAN Q, LIU Z B, et al. Natural variation at the DEP1 locus enhances grain yield in rice[J]. Nature Genetics, 2009, 41(4): 494-497. DOI: 10.1038/ng.352
doi: 10.1038/ng.352
|
|
|
[12] |
SHAO Y L, ZHOU H Z, WU Y R, et al. OsSPL3, an SBP-domain protein, regulates crown root development in rice[J]. The Plant Cell, 2019, 31(6): 1257-1275. DOI: 10.1105/tpc.19.00038
doi: 10.1105/tpc.19.00038
|
|
|
[13] |
ZHOU M Q, TANG W. MicroRNA156 amplifies transcription factor-associated cold stress tolerance in plant cells[J]. Molecular Genetics and Genomics, 2019, 294(2): 379-393. DOI: 10.1007/s00438-018-1516-4
doi: 10.1007/s00438-018-1516-4
|
|
|
[14] |
BIRKENBIHL R P, JACH G D, SAEDLER H, et al. Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains[J]. Journal of Molecular Biology, 2005, 352(3): 585-596. DOI: 10.1016/j.jmb.2005.07.013
doi: 10.1016/j.jmb.2005.07.013
|
|
|
[15] |
SHALOM L, SHLIZERMAN L, ZUR N, et al. Molecular characterization of SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL)gene family from Citrus and the effect of fruit load on their expression[J]. Frontier in Plant Science, 2015, 6: 389. DOI: 10.3389/fpls.2015.00389
doi: 10.3389/fpls.2015.00389
|
|
|
[16] |
NANDA S, HUSSAIN S. Genome-wide identification of the SPL gene family in Dichanthelium oligosanthes [J]. Bioinfor-mation, 2019, 15(3): 165-171. DOI: 10.6026/97320630015165
doi: 10.6026/97320630015165
|
|
|
[17] |
XIONG J S, ZHENG D, ZHU H Y, et al. Genome-wide identification and expression analysis of the SPL gene family in woodland strawberry Fragaria vesca [J]. Genome, 2018, 61(9): 675-683. DOI: 10.1139/gen-2018-0014
doi: 10.1139/gen-2018-0014
|
|
|
[18] |
CAI C P, GUO W Z, ZHANG B H. Genome-wide identification and characterization of SPL transcription factor family and their evolution and expression profiling analysis in cotton[J]. Scientific Reports, 2018, 8(1): 762. DOI: 10.1038/s41598-017-18673-4
doi: 10.1038/s41598-017-18673-4
|
|
|
[19] |
LI J, HOU H M, LI X Q, et al. Genome-wide identification and analysis of the SBP-box family genes in apple (Malus×domestica Borkh.)[J]. Plant Physiology and Biochemistry, 2013, 70: 100-114. DOI: 10.1016/j.plaphy.2013.05.021
doi: 10.1016/j.plaphy.2013.05.021
|
|
|
[20] |
PAN F, WANG Y, LIU H L, et al. Genome-wide identification and expression analysis of SBP-like transcription factor genes in moso bamboo (Phyllostachys edulis)[J]. BMC Genomics, 2017, 18: 486. DOI: 10.1186/s12864-017-3882-4
doi: 10.1186/s12864-017-3882-4
|
|
|
[21] |
ZHANG B, XU W N, LIU X, et al. Functional conservation and divergence among homoeologs of TaSPL20 and TaSPL21, two SBP-box genes governing yield-related traits in hexaploid wheat[J]. Plant Physiology, 2017, 174(2): 1177-1191. DOI: 10.1104/pp.17.00113
doi: 10.1104/pp.17.00113
|
|
|
[22] |
LI L, SHI F, WANG Y Q, et al. TaSPL13 regulates inflorescence architecture and development in transgenic wheat (Triticum aestivum L.)[J]. Plant Science, 2020, 296: 110516. DOI: 10.1016/j.plantscience.2020.110516
doi: 10.1016/j.plantscience.2020.110516
|
|
|
[23] |
TRIPATHI R K, BREGITZER P, SINGH J. Genome-wide analysis of the SPL/miR156 module and its interaction with the AP2/miR172 unit in barley[J]. Scientific Reports, 2018, 8(1): 7085. DOI: 10.1038/s41598-018-25349-0
doi: 10.1038/s41598-018-25349-0
|
|
|
[24] |
LI S K, LI L, JIANG Y, et al. SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) gene family: transcriptome-wide identification, phylogenetic relationship, expression patterns and network interaction analysis in Panax ginseng C. A. Meyer[J]. Plants, 2020, 9(3): 354. DOI: 10.3390/plants9030354
doi: 10.3390/plants9030354
|
|
|
[25] |
PRESTON J C, JORGENSEN S A, OROZCO R, et al. Paralogous SQUAMOSA PROMOTER BINDING PROTEIN-LIKE (SPL) genes differentially regulate leaf initiation and reproductive phase change in petunia[J]. Planta, 2016, 243(2): 429-440. DOI: 10.1007/s00425-015-2413-2
doi: 10.1007/s00425-015-2413-2
|
|
|
[26] |
BRAY E A. Molecular responses to water deficit[J]. Plant Physiology, 1993, 103(4): 1035-1040. DOI: 10.1104/pp.103.4.1035
doi: 10.1104/pp.103.4.1035
|
|
|
[27] |
YUE B, XUE W Y, XIONG L Z, et al. Genetic basis of drought resistance at reproductive stage in rice: separation of drought tolerance from drought avoidance[J]. Genetics, 2006, 172(2): 1213-1228. DOI: 10.1534/genetics.105.045062
doi: 10.1534/genetics.105.045062
|
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