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浙江大学学报(农业与生命科学版)  2020, Vol. 46 Issue (5): 604-610    DOI: 10.3785/j.issn.1008-9209.2019.12.271
动物科学与动物医学     
扬子鳄β防御素基因的血液表达谱及饲养密度对防御素基因表达的影响
陆瑶(),方盛国()
浙江大学生命科学学院,生命系统稳态与保护教育部重点实验室/国家濒危野生动植物种质基因保护中心,杭州 310058
Expression profile of β-defensin genes and the effect of stocking density on them in Chinese alligator blood
Yao LU(),Shengguo FANG()
MOE Key Laboratory of Biosystems Homeostasis and Protection/State Conservation Center for Gene Resources of Endangered Wildlife, College of Life Sciences, Zhejiang University, Hangzhou 310058, China
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摘要:

为研究扬子鳄血液中β防御素基因家族的表达水平和饲养密度对群体防御素基因表达的影响,利用反转录荧光定量聚合酶链式反应(reverse transcription quantitative polymerase chain reaction, RT-qPCR)技术检测41头扬子鳄七龄鳄血液中β防御素基因的表达情况,并分析不同性别和不同饲养密度群体间防御素基因相对表达量的差异。结果表明:在扬子鳄群体血液中,表达的防御素基因有AsBD5AsBD8,并且这2个基因的表达量之间存在显著的正相关性。AsBD5AsBD8在雌性和雄性扬子鳄间的表达水平没有显著性差异;但是在不同饲养密度下,2个扬子鳄群体间的表达水平存在显著差异,其中饲养密度较高的扬子鳄群体,整体的防御素表达水平更高,表明饲养密度对扬子鳄圈养种群的免疫状态有一定的影响。

关键词: 扬子鳄β防御素基因饲养密度反转录荧光定量聚合酶链式反应    
Abstract:

In order to investigate the expression profile of β-defensin genes in the blood of Chinese alligator and the effect of stocking density on them, reverse transcription quantitative polymerase chain reaction (RT-qPCR) was used to detect the expression levels of β-defensin genes in blood samples from 41 seven-year-old Chinese alligators and study the defensin gene expression level differences between sexes and populations with different stocking densities. The results showed that only the AsBD5 and AsBD8 genes expressed in the blood of Chinese alligator, and there was a significantly positive correlation between their expression levels. There was no significant sex-biased difference of the defensin gene expression levels. However, their expression levels were significantly different between the two populations with different stocking densities. The defensin gene expression levels were significantly higher in the Chinese alligator population with higher stocking density, which indicating that the stocking density has some effect on the immune status of the captive Chinese alligator.

Key words: Chinese alligator    β-defensin gene    stocking density    reverse transcription quantitative polymerase chain reaction (RT-qPCR)
收稿日期: 2019-12-27 出版日期: 2020-11-19
CLC:  S 86  
基金资助: 国家自然科学基金重点项目(31530087);国家重点研发计划(2016YFC0503200);国家林业和草原局专项经费;中央直属高校基本科研业务费
通讯作者: 方盛国     E-mail: luyao2017@zju.edu.cn;sgfanglab@zju.edu.cn
作者简介: 陆瑶(https://orcid.org/0000-0002-4151-0555),E-mail:luyao2017@zju.edu.cn
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引用本文:

陆瑶,方盛国. 扬子鳄β防御素基因的血液表达谱及饲养密度对防御素基因表达的影响[J]. 浙江大学学报(农业与生命科学版), 2020, 46(5): 604-610.

Yao LU,Shengguo FANG. Expression profile of β-defensin genes and the effect of stocking density on them in Chinese alligator blood. Journal of Zhejiang University (Agriculture and Life Sciences), 2020, 46(5): 604-610.

链接本文:

http://www.zjujournals.com/agr/CN/10.3785/j.issn.1008-9209.2019.12.271        http://www.zjujournals.com/agr/CN/Y2020/V46/I5/604

处理

Treatment

饲养池面积

Breeding

area/m2

群体大小

Population

size

群体密度

Population

density/

(capita/m2

样本大小

Sample size

饲养池A69.7210.3016
饲养池B140.0770.5525
表1  扬子鳄七龄鳄群体特征和样本信息
图1  扬子鳄血液(A)和组织(B)总RNA的电泳结果M:DL2000分子标志物。图A中编号1~8代表8个扬子鳄个体的血液RNA;图B中编号1~8代表扬子鳄心、肝、脑、肺、肾、胃、小肠、肌肉等8个组织的RNA。

基因名称

Gene name

引物序列(5′→3′)

Primer sequence (5′→3′)

产物大小

Product size/bp

退火温度

Annealing temperature/℃

扩增效率

Amplification efficiency/%

AsBD5F: TACGGCGAACGAGAGAC12358.393.27
R: TGCAGCCAAAGGAAATG
AsBD8F: ACCTTCTCTTCGCTGTTTCC13253.9101.23
R: CAATGTACTTGGTGTTCGGG
AsBD10F: GTGGCATGCAGAAGTCAACA10353.795.41
R: TTGAACAGCAAAGCAAGGCT
AsBD13F: GTAATTGCAACGGTGGGC12452.094.41
R: TTGCTGTGGTGTGGTCTCTC
AsBD101F: GTGAGGAGCAGATTGGGACT8652.096.24
R: CAGCCTGCTTGCCTGTATC
AsBD105γF: AGATGTCGCTGGTATGGGAT15853.092.94
R: TGGTGCTGGCTTAGAGGATT
AsBD106γF: CTTCTCTTTGCCCTGGTCC13558.596.62
R: CACATCGCCTTTTGTTTCC
AsBD107αF: TGGCAGCCCCAGAAAACAG10950.999.06
R: GCACAGGATCCCAACTTGACTT
AsBD108F: AAGCCCAGGGATCATGAAGA9858.5108.48
R: CGTTCAGCAGGTTACATGGC
GAPDHF: GGAAGATGTGGCGGGATG60134.097.28
R: TGTTGGGACACGGAATGC
表2  qPCR引物信息
图2  扬子鳄七龄鳄群体血液中β防御素基因AsBD5和AsBD8的相对表达量
图3  不同性别(A)和不同饲养密度(B)的扬子鳄群体β防御素基因的相对表达量***表示在P<0.001水平差异有极高度统计学意义。
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