Please wait a minute...
J Zhejiang Univ (Med Sci)  2019, Vol. 48 Issue (1): 5-11    DOI: 10.3785/j.issn.1008-9292.2019.02.02
    
Extraction and purification of NUDT9 homology domain of human transient receptor potential melastatin 2 channel
YE Peiwu1(),YU Xiafei1,MA Cheng2,YANG Wei1()
1.Department of Biophysics, Zhejiang University School of Medicine, Hangzhou 310058, China
2.Protein Facility, Zhejiang University School of Medicine, Hangzhou 310058, China
Download: HTML( 38 )   PDF(1227KB)
Export: BibTeX | EndNote (RIS)      

Abstract   Objective

To develop methods of extraction and purification of C-terminal NUDT9 homology domain of human transient receptor potential melastatin 2 (TRPM2) channel.

Methods

After sonication and centrifuge of Escherichia coli strain Rosetta (DE3) which was induced by isopropylthio-β-D-galactoside, GST-NUDT9-H was collected after the binding of supernatant with GST beads and eluted with reduced glutathione. Then the elution buffer containing fusion protein was purified by size exclusion chromatography after concentration and centrifuge. Finally, with the cleavage of thrombin and binding with the GST beads, NUDT9-H with high purity in supernatant was collected.

Results

The GST-NUDT9-H fusion protein was stabilized with lysis buffer containing 0.5% n-dodecyl-β-d-maltoside (DDM), and wash buffer containing 0.025% DDM in size-exclusion chromatography system, and finally the NUDT9-H with high purity was obtained after cleaved by thrombin (1 U/2 mg fusion protein) for 24 h.

Conclusion

Due to the poor stability of NUDT9-H, it is necessary to add DDM in extraction and purification buffer to stabilize the conformation of NUDT9-H, so as to increase its yields and purity.



Key wordsTransient receptor potential channels      Pyrophosphatases/pharmacology      Recombinant fusion proteins/isolation & purification      Glutathione transferase     
Received: 30 September 2018      Published: 10 May 2019
CLC:  Q71  
Corresponding Authors: YANG Wei     E-mail: yegucheng@zju.edu.cn;yangwei@zju.edu.cn
Cite this article:

YE Peiwu,YU Xiafei,MA Cheng,YANG Wei. Extraction and purification of NUDT9 homology domain of human transient receptor potential melastatin 2 channel. J Zhejiang Univ (Med Sci), 2019, 48(1): 5-11.

URL:

http://www.zjujournals.com/med/10.3785/j.issn.1008-9292.2019.02.02     OR     http://www.zjujournals.com/med/Y2019/V48/I1/5


人源瞬时受体电位M2型通道Nudix水解酶9同源结构域的提取和纯化

目的

摸索人源瞬时受体电位M2型通道(TRPM2)羧基端Nudix水解酶9(NUDT9)同源结构域(NUDT9-H)的蛋白提取和纯化方法。

方法

异丙基硫代半乳糖苷诱导表达的Rosetta(DE3)大肠埃希菌菌株经超声破碎和离心后,将收集到的上清液与GST磁珠结合并用还原型谷胱甘肽洗脱以抽提GST-NUDT9-H融合蛋白,浓缩离心后再经分子排阻色谱层析纯化,最后经凝血酶酶切并与GST磁珠结合即得NUDT9-H蛋白。

结果

含有0.5%的十二烷基-β-D-麦芽糖苷(DDM)裂解溶液体系和0.025%的DDM分子排阻层析色谱溶液体系能够提高GST-NUDT9-H融合蛋白的稳定性,再按每2 mg融合蛋白加入1 U凝血酶切割24 h,即获得高纯度NUDT9-H蛋白。

结论

NUDT9-H蛋白稳定性较差,提取和纯化体系中需添加DDM以稳定其构象从而提高目的蛋白的产量和纯度。


关键词: 瞬时受体电位通道,  焦磷酸酶类/药理学,  重组融合蛋白质类/分离和提纯,  谷胱甘肽转移酶 
Figure 1 Identification and purification of GST-NUDT9-H fusion protein without detergent
Figure 2 The effect of double concentration of protein inhibitor or the addition of DDM on the extraction of GST-NUDT9-H fusion protein
Figure 3 Re-binding of the lysate with regenerative GST beads leads to higher production of fusion protein
Figure 4 0.025% DDM in wash buffer stabilized the fusion protein in purification system
Figure 5 Optimization on the cleavage time and concentration of thrombin
[1]   PERRAUD A L , FLEIG A , DUNN C A , et al . ADP-ribose gating of the calcium-permeable LTRPC2 channel revealed by Nudix motif homology[J]. Nature,2001,411(6837):595-599.
[2]   SANO Y , INAMURA K , MIYAKE A , et al . Immunocyte Ca2+ influx system mediated by LTRPC2[J]. Science,2001,293(5533):1327-1330.
[3]   BUELOW B , UZUNPARMAK B , PADDOCK M , et al . Structure/function analysis of PARP-1 in oxidative and nitrosative stress-induced monomeric ADPR formation[J/OL]. PLoS One,2009,4(7):e6339.
[4]   ZHU Y , ZHAO K K , TONG Y , et al . Exogenous NAD(+) decreases oxidative stress and protects H2O2-treated RPE cells against necrotic death through the up-regulation of autophagy[J]. Sci Rep,2016,6:26322.
[5]   KüHN F , KüHN C , LüCKHOFF A . Different principles of ADP-ribose-mediated activation and opposite roles of the NUDT9 homology domain in the TRPM2 orthologs of man and sea anemone[J]. Front Physiol,2017,8:879.
[6]   BESSMAN M J , FRICK D N , O'HANDLEY S F . The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes[J]. J Biol Chem,1996,271(41):25059-25062.
[7]   D?LLE C , RACK J G , ZIEGLER M . NAD and ADP-ribose metabolism in mitochondria[J]. FEBS J,2013,280(15):3530-3541.
[8]   KISS B , SZáNTó M , SZKLENáR M , et al . Poly(ADP) ribose polymerase-1 ablation alters eicosanoid and docosanoid signaling and metabolism in a murine model of contact hypersensitivity[J]. Mol Med Rep,2015,11(4):2861-2867.
[9]   CARLOTO A , COSTAS M J , CAMESELLE J C , et al . The specific, submicromolar-Km ADP-ribose pyrophosphatase purified from human placenta is enzymically indistinguishable from recombinant NUDT9 protein, including a selectivity for Mn2+ as activating cation and increase in Km for ADP-ribose, both elicited by H2O2 [J]. Biochim Biophys Acta,2006,1760(10):1545-1551.
[10]   JAMBUNATHAN N , PENAGANTI A , TANG Y , et al . Modulation of redox homeostasis under suboptimal conditions by Arabidopsis nudix hydrolase 7[J]. BMC Plant Biol,2010,10:173.
[11]   YU P , XUE X , ZHANG J , et al . Identification of the ADPR binding pocket in the NUDT9 homology domain of TRPM2[J]. J Gen Physiol,2017,149(2):219-235.
[12]   ZHANG Z , TóTH B , SZOLLOSI A , et al . Structure of a TRPM2 channel in complex with Ca2 + explains unique gating regulation[J/OL]. Elife,2018,7:e36409.
[1] XU Lizhen,YANG Fan. Structural modeling of selectivity filter in transient receptor pontential melastatin 8 ion channel[J]. J Zhejiang Univ (Med Sci), 2019, 48(1): 19-24.
[2] FANG Minbo, CHEN Qixing, WU Shuijing, FANG Xiangming. Association of single nucleotide polymorphism in exon of transient receptor potential melastatin 2 gene with sepsis[J]. J Zhejiang Univ (Med Sci), 2016, 45(4): 410-415.
[3] CHAI Xiao-juan, HU Hai-hong, YU Lu-shan, ZENG Su . Expression of human glutathione S-transferase A1, P1 and T1 in Escherichia coli[J]. J Zhejiang Univ (Med Sci), 2014, 43(2): 168-174.
[4] LI Tong, GUO Mei-Yuan, MA Kui-Fen, DU Yue, He-Liang-Yan, ZHU Dan-Yan, LOU Yi-Jia. Characteristics of microsomal phase Ⅱ metabolic enzymes in mouse embryonic stem cell-derived liver tissue[J]. J Zhejiang Univ (Med Sci), 2013, 42(5): 530-537.
[5] . Effect of hydrogen sulfide-induced delayed preconditioning on glutathione S-transferase expression during myocardial ischemia-reperfusion in rats[J]. J Zhejiang Univ (Med Sci), 2011, 40(5): 535-539.